Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946788.1_cds_XP_016488797.1_79390
CDS Infomation

[gene=LOC107808745] [db_xref=GeneID:107808745] [protein=transcription initiation factor TFIID subunit 6-like] [protein_id=XP_016488797.1] [location=join(4396..4521,4810..4896,5171..5272,5366..5474,5726..5829,5919..6056,6139..6234,6656..6780,7174..7306,7388..7513,7663..7774,8328..8707)] [gbkey=CDS]
Sequence

ATGAGCACAGTTCCGAAAGAGACAATAGAAGTGATAGCACAAAGTATAGGTGTAAGCAAT
TTATCTCCAGATGTCTTGCCTGCTCTCTCCGCTGATGTCGAATACCGTATTCGGGAGATT
ATGCAGGAAGCTATTAAATGTATGCGTCATTCGAAGAGAACGACCTTATCTACTGATGAT
GTGGATGCTGCACTCAGCTTGAGAGGCGTAGAGCCAATATATGGTTTAGCTTCAGGAGAT
CCGTTAAGGTTCAGAAGAGCAGCTGGACACAAGGATTTGTTCTACATTGAAGAGAAGGAT
GTAGAGTTAAAAGATGTGATCGAAGCTCCTTTGCCTAAAGCACCGTTAGACACTGCTATT
GTTGCCCATTGGTTAGCTATAGATGGAGTACAGCCTGCTATTCCTGAAAACCCTCCGCCT
GAAGCCTTTGCTATGCCCTCTGATAATAGGAAGACCGAGTATAAGGAGGATGGAGTTCCT
GTTGATATTAAAGTACCTGTTAAGCATGTTCTATCCCGTGAGCTCCAGCTCTATTATGAC
AAAATTACAGAGCTTACTTTGAATAGATCGAATCCTCTTCTCTTTAAAGAAGCTCTAGCA
AGCTTAGCAACGGACTCAGGGATTCATCCTTTAGTTCCTTACTTTACATATTTTGTTGCT
GATGAGGTTGCTCGGAAATTGAACAATTTTCCTCTCCTTTTCTCTTTGATGCGGCTAGTC
TGGAGCCTTCTCCAGAATACACAAATACATATGGAACCATATCTGCACCAGTTGATGCCT
TCTATATTGACATGCCTTGTTGCAAAAAGGCTGGGAAACAGAATTTCTGACAATCATTGG
GAACTTAGGGACTTCTCAGCAAAGTTGGTTGCTTTAATATGCAAGAGACATGGTCATATG
TACCACAATCTCCAGCCACGTGTCACCAGGACTTTGTTGCATGCTTTTCTGGATCCAACT
AAGGCGCTGTCTCAACATTATGGAGCAATACAAGGGCTAGCAGCTCTTGGACCTGGTGTG
GTTCGCCTACTTGTGCTGCCAAATCTTGAGGTTTATTTGCAATTGCTAGAGTCCGAAATG
CAGCTTGAGAAGCAAAAAAATGAAATGAAGAGGCTTGAAGCTTGGCGTGTATATGGAGCC
TTGATGTGTGCTGCTGGTTTATGTATCTATGAGCGCTTCAAGTTGCTTCCTGCTTCATTA
TCTCCATCTACTCGCACATTCCTGAAGAATAAATGGAAAGTCTCAACTACATTGTCAAAC
AAACGCAAAGCAAGCCTGGATAACATGATGACGCAGCCTCCACCCAAGAAATTAATGACA
GACGGTCCAACAGGTTCAATGACAACAAATTCTTTGCCAGTAAGCACGCAAGGACCGGCT
GGTCGATACGCTGCAACCCTGGGAGCCACGGAAACTGGTCTATCATCAGCACCACAAGGT
TTGCACAACGAGAATATGCCAAGAAGCAGCAGCAGAAGGGAGATGGCTGGTGTGCAAGGT
CAAAAAACGTCGGCTACTCTTGATCAGGCCTGGAAGGAAGATTTGGATGTCGCGCATTTG
TTGCCATCTCTGTTTGAATGTTTTGGTGAAAGGATGTTTCCATTTACCCCTTCACCGGAG
TTGTCTTTCTTTCTGTGA

Peptide Sequence

PEP ID

XP_016488797.1
PEP Infomation

PREDICTED: transcription initiation factor TFIID subunit 6-like [Nicotiana tabacum]
Sequence

MSTVPKETIEVIAQSIGVSNLSPDVLPALSADVEYRIREIMQEAIKCMRHSKRTTLSTDD
VDAALSLRGVEPIYGLASGDPLRFRRAAGHKDLFYIEEKDVELKDVIEAPLPKAPLDTAI
VAHWLAIDGVQPAIPENPPPEAFAMPSDNRKTEYKEDGVPVDIKVPVKHVLSRELQLYYD
KITELTLNRSNPLLFKEALASLATDSGIHPLVPYFTYFVADEVARKLNNFPLLFSLMRLV
WSLLQNTQIHMEPYLHQLMPSILTCLVAKRLGNRISDNHWELRDFSAKLVALICKRHGHM
YHNLQPRVTRTLLHAFLDPTKALSQHYGAIQGLAALGPGVVRLLVLPNLEVYLQLLESEM
QLEKQKNEMKRLEAWRVYGALMCAAGLCIYERFKLLPASLSPSTRTFLKNKWKVSTTLSN
KRKASLDNMMTQPPPKKLMTDGPTGSMTTNSLPVSTQGPAGRYAATLGATETGLSSAPQG
LHNENMPRSSSRREMAGVQGQKTSATLDQAWKEDLDVAHLLPSLFECFGERMFPFTPSPE
LSFFL

Transcript Sequence

Gene sequence data has not been registered.